CDS

Accession Number TCMCG017C05710
gbkey CDS
Protein Id OMP07507.1
Location complement(join(18116..18714,19103..19471,19745..20831,21769..22011))
GeneID InterPro:IPR009401
Organism Corchorus olitorius
locus_tag COLO4_07280

Protein

Length 765aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013197.1
Definition Mediator complex, subunit Med13 [Corchorus olitorius]
Locus_tag COLO4_07280

EGGNOG-MAPPER Annotation

COG_category K
Description Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15164        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04919        [VIEW IN KEGG]
map04919        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008643        [VIEW IN EMBL-EBI]
GO:0015144        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0034219        [VIEW IN EMBL-EBI]
GO:0040034        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0051119        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0090213        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGATAGACTCTGGGAAGTGGTCTGCTTCTGGCTTTGTCCTACTTGATTGTCCGCAATCAATGAAGATAGAAAGCAATAATGCATCGCTCCTGGGATCAATAAGTGATTATTTTCTTTCTCTATCAAATGGTTGGGACCTGGCTTGCTATCTCAAGTCCCTTTCTAAGGCACTTAAAGCGTTGAAGCTTGGTCAATTTTTGTCTACAAACCAGAAGGAAGGGATAAGCGGCCCTTGCATGGTTATATATGTGGTTTGCCCCTTTCCTGAGCCTACTGCAGTCCTGAAAACGGTCATTGAATCTTCTATTGCTGTTGGATCAATTATTCTGCCCTCAGATAGAGAGAGGAGATCTGTACTGCACAGTCAGGTGGGAAAGGCATTAAGCAGCTCAGCAGCTGCTGATGAAGCTTCAATATCCAATATTCCGGTTGTTTCAGGGTTTAGTGTTCCTAAATTGGTACTGCAGATTGTGACAGTGGATGCCATTTTTAGGGTTACAAGCCCACCTTTTAATGAACTTGTTGTTCTTAAGGAGACTGCTTTCACTATATACAACAAAGCTCGGCGGATTTCACGAGGATCTGTGAATGATGTCCTGTCATCATCGTTTTCTAATAGATCTCATTCTGTCTTGACTCCTATGACATCTATCCCTGGAATGTGGAATTCTCGTATATCAGGATCTTCTCTACCTAGAGAGGGTGAAATTGATTCCAGCTTGAGGGCTGGTGCTTGGGACAATTCATGGCAAGCAACAAGGACAGGAGGATTAAGTTGTGATCCAAACAGAAATGGTGATATCTACTATCAAGATGAAGTTCGTTACATGTTTGAACCACTTTTTATTCTTGCAGAGTCTGGTTCTGTGGAACATGGAGTTTCACCTACGGGTTTTGGTAATTTAACCTCTGAAACTTCGAAGACAGTTTCGGATGAAAGTAGTGGAGGTTTCATGCAGAATGCAAATTCAACTGGAAGTATTGATCCTGGCTCAGGCTCGCAGTTTGATACGTCAGAGCCTGATGCGCTTAGTTCTGGTAGCCACAAGACTCCAAGCTTACATTGCTGCTATGGGTGGACGGAAGATTGGCGATGGCTGGTATGCACATGGACGGATGCAAGGGGGGAATTGCTTGACTGCAACATATTTCCATTTGGTGGAATTAGCAGTAGACAGGACACAAAAGGTCTTCAGTGCCTTTTTGTACAAGTTCTTCAGCAAGGCTGTCAAATACTTCAGACATGTGCTTTTGATACTGGTGTTATCAAGCCTAGAGACTTCGTGATCACTCGCATTGGAAATTTCTATGAGCTTGAATACCTAGAGTGGCAAAAAGCTATCTATTCAGTTGGCGGATCTGAGGTAAAAAAATGGCCTCTACAGCTGCGCAGATCTGTTCCTGATGGTATGCCTGCTAGTACAAATGGAACTTCTCTGCAGCAGCAGGAGATGAGTTTGATTCAAGAGAGAACTCTGCCTTCCTCACCTAGTCCATTATACAGCCCCCACACAAAGACTGGCTTTATGAAAGGTGGTTTAGGGCAACCTGCTGCAAGAAAGCAGCTTATGAGTGGACATACAATAGTTGATAACTCGAGGGGATTGCTTCAGTGGGTGCAGAGTATTAGTTTTGTTTCAGTTTCAGTTGACCATTCTTTACATCTAGTGCTCCAAGCAGATGGAATATCTCCCGGAACTCATGGTGTGGGTGGTATGGGCCAATCAAGCTACATAGAAGGGTTCACTCCTGTAAAATCTCTGGGTTCAGCATCTGCTTCTTACATGTTAATCCCGTCACCAAGCATGCGCTTCCTACCCCCAACACCTCTTCAACTTCCAATATGTCTCACTGCTGAATCACCTCCACTCGCTCATCTTCTTCACAGCAAGGGCTCTGCAATCCCCCTTTCCACCGGTTTCGTGGTTTCAAAGGCTGTGCCTTCTATGAGGAGAGATTATAGGAATTACACAAAAGAAGAATGGCCTTCCATTCTTTCGGTTAGTCTCATTGATTATTATGGGGGTAATAATGTTGGCCAAATGAGAGGAATGGCTAAGCAGGCAGGAAGTAGTGTGAGCTCTGAAGCTAGAGATTTTGAAATTGATAACCATTTGATTTTGGAGTCTGTTGCAGCAGAGCTTCATGCTCTGTCATGGATGACAATCAGTCCAGGATACTTGGAAAGGCGAAGTGCGCTGCCGTTTCACTGTGATATGGTTTTGAGGCTGAGAAGATTGCTTCATTTTGCAGAAAAAGAGCTCTCTCGACAGCCAGACAAGCCACAAGTGTAA
Protein:  
MEIDSGKWSASGFVLLDCPQSMKIESNNASLLGSISDYFLSLSNGWDLACYLKSLSKALKALKLGQFLSTNQKEGISGPCMVIYVVCPFPEPTAVLKTVIESSIAVGSIILPSDRERRSVLHSQVGKALSSSAAADEASISNIPVVSGFSVPKLVLQIVTVDAIFRVTSPPFNELVVLKETAFTIYNKARRISRGSVNDVLSSSFSNRSHSVLTPMTSIPGMWNSRISGSSLPREGEIDSSLRAGAWDNSWQATRTGGLSCDPNRNGDIYYQDEVRYMFEPLFILAESGSVEHGVSPTGFGNLTSETSKTVSDESSGGFMQNANSTGSIDPGSGSQFDTSEPDALSSGSHKTPSLHCCYGWTEDWRWLVCTWTDARGELLDCNIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQTCAFDTGVIKPRDFVITRIGNFYELEYLEWQKAIYSVGGSEVKKWPLQLRRSVPDGMPASTNGTSLQQQEMSLIQERTLPSSPSPLYSPHTKTGFMKGGLGQPAARKQLMSGHTIVDNSRGLLQWVQSISFVSVSVDHSLHLVLQADGISPGTHGVGGMGQSSYIEGFTPVKSLGSASASYMLIPSPSMRFLPPTPLQLPICLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRRDYRNYTKEEWPSILSVSLIDYYGGNNVGQMRGMAKQAGSSVSSEARDFEIDNHLILESVAAELHALSWMTISPGYLERRSALPFHCDMVLRLRRLLHFAEKELSRQPDKPQV